Package: ProliferativeIndex 1.0.1

ProliferativeIndex: Calculates and Analyzes the Proliferative Index

Provides functions for calculating and analyzing the proliferative index (PI) from an RNA-seq dataset. As described in Ramaker & Lasseigne, et al. bioRxiv, 2016 <doi:10.1101/063057>.

Authors:Brittany Lasseigne [aut, cre], Ryne Ramaker [aut]

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ProliferativeIndex.pdf |ProliferativeIndex.html✨
ProliferativeIndex/json (API)

# Install 'ProliferativeIndex' in R:
install.packages('ProliferativeIndex', repos = c('https://blasseigne.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/blasseigne/proliferativeindex/issues

Datasets:

On CRAN:

cancercancer-genomicsgene-expressiongenomicsindexmetagene

3.70 score 10 scripts 160 downloads 1 mentions 4 exports 0 dependencies

Last updated 6 years agofrom:8e85e9c7c6. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 10 2024
R-4.5-winOKNov 10 2024
R-4.5-linuxOKNov 10 2024
R-4.4-winOKNov 10 2024
R-4.4-macOKNov 10 2024
R-4.3-winOKNov 10 2024
R-4.3-macOKNov 10 2024

Exports:calculatePIcompareModeltoPIcomparePIreadDataForPI

Dependencies:

ProliferativeIndex Vignette

Brittany N. Lasseigne, PhD and Ryne C. Ramaker

Rendered fromProliferativeIndexVignette.Rmdusingknitr::rmarkdownon Nov 10 2024.

Last update: 2018-08-14
Started: 2016-07-05