Example Data Set | readDataForPI function | calculatePI function | comparePI function | compareModeltoPI function
Package: ProliferativeIndex 1.0.1
ProliferativeIndex: Calculates and Analyzes the Proliferative Index
Provides functions for calculating and analyzing the proliferative index (PI) from an RNA-seq dataset. As described in Ramaker & Lasseigne, et al. bioRxiv, 2016 <doi:10.1101/063057>.
Authors:
ProliferativeIndex_1.0.1.tar.gz
ProliferativeIndex_1.0.1.zip(r-4.7-any)ProliferativeIndex_1.0.1.zip(r-4.6-any)ProliferativeIndex_1.0.1.zip(r-4.5-any)
ProliferativeIndex_1.0.1.tgz(r-4.6-any)ProliferativeIndex_1.0.1.tgz(r-4.5-any)
ProliferativeIndex_1.0.1.tar.gz(r-4.7-any)ProliferativeIndex_1.0.1.tar.gz(r-4.6-any)
ProliferativeIndex_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
ProliferativeIndex/json (API)
| # Install 'ProliferativeIndex' in R: |
| install.packages('ProliferativeIndex', repos = c('https://blasseigne.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/blasseigne/proliferativeindex/issues
Datasets:
- exReadDataObj - TCGA ACC data set output from readDataForPI function
- exVSTPI - TCGA ACC data set output from calculatePI function
- vstTCGA_ACCData_sub - TCGA ACC data set
cancercancer-genomicsgene-expressiongenomicsindexmetagene
Last updated from:8e85e9c7c6. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 119 | ||
| source / vignettes | OK | 174 | ||
| linux-release | OK | 114 | ||
| macos-release | OK | 137 | ||
| macos-oldrel | OK | 195 | ||
| windows-devel | OK | 70 | ||
| windows-release | OK | 83 | ||
| windows-oldrel | OK | 60 | ||
| wasm-release | OK | 92 |
Exports:calculatePIcompareModeltoPIcomparePIreadDataForPI
Dependencies:
